Job Description

SCIENTIFIC PROGRAMMER

SAN FRANCISCO, CALIFORNIA

San Francisco, in northern California, is known for its year-round fog, iconic Golden Gate Bridge, cable cars and colorful Victorian houses. It’s part of a nine-county region that include Alameda, Contra Costa, Marin, Napa, San Francisco, San Mateo, Santa Clara, Solano and Sonoma counties. The greater Bay Area Region is the second-largest in California (after the Greater Los Angeles area). With a low unemployment rate, San Francisco is a great place for talented healthcare professionals to live. Whether you prefer to work in a hospital, clinic, home care or senior housing setting—San Francisco Bay Area job opportunities in healthcare are abundant.

On Time Talent Solutions is seeking a Scientific Programmer who will be focused on research issues related to Programming and Software Development and deployment, as well as Data Science training in Biomedical Informatics.

SCIENTIFIC PROGRAMMER RESPONSIBILITIES:

• Apply industry and regulatory standards to create and maintain standardized databases for clinical trial data

• Work in tandem with Biostatistics and Data Management member on various clinical projects

• Design, development, deployment and troubleshooting for novel software and code to support large-scale variant aggregation and quality control

• Program statistical analyses (via analysis datasets, tables, figures, listings, etc.) using an appropriate statistical analysis systems

• Perform quality review of analysis dataset and TFL programs developed by other programmers and biostatisticians

• Collaborate with other team members to develop quality reports, publications, and regulatory submissions

SCIENTIFIC PROGRAMMER QUALIFICATIONS:

• Bachelor’s or Master’s degree in computer science, engineering or a related field

• Relational Database Experience: SQL, XML, .NET, C#, JSPs, XSLT, JAVA, Apache / Tomcat, JBoss, IIS,

• An understanding of SNOMED CT, LOINC and RxNorm is preferred

• NGS sequence analysis tools (e.g., BWA, Samtools, bedtools, bamUtils, Picard, GATK,vcftools,bcftools)

• Experience with common genomics data formats (e.g., FASTQ, BAM, VCF, BED)

• 5 years of statistical programming experience is desired

• Demonstrated experience in software development or testing